autocycler

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  "desc": "Tool for generating consensus long-read assemblies for bacterial genomes",
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  "enrichment_fetched_at": "2026-06-20T23:35:38+00:00",
  "first_seen": "2026-06-20T23:34:18+00:00",
  "full_name": "autocycler",
  "github_default_branch": "main",
  "github_last_commit_at": "2026-04-27T06:18:37Z",
  "github_readme_excerpt": "\u003cp align=\"center\"\u003e\u003cimg src=\"https://github.com/rrwick/Autocycler/wiki/images/logo.png\" alt=\"Autocycler logo\" width=\"90%\"\u003e\u003c/p\u003e\n\n[![License GPL v3](https://img.shields.io/badge/license-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) ![Rust](https://github.com/rrwick/Autocycler/actions/workflows/rust.yml/badge.svg) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.14642607.svg)](https://doi.org/10.5281/zenodo.14642607)\n\nAutocycler is a tool for generating consensus long-read assemblies for bacterial genomes. It is the successor to [Trycycler](https://github.com/rrwick/Trycycler), and for most users, I recommend Autocycler over Trycycler.\n\nFor installation instructions, usage, deeper explanations and more, head over to the [Autocycler wiki](https://github.com/rrwick/Autocycler/wiki)!\n\nIf you use Autocycler in your research, please cite the following paper:\u003cbr\u003e\n[Wick RR, Howden BP, Stinear TP (2025). Autocycler: long-read consensus assembly for bacterial genomes. _Bioinformatics_. doi:10.1093/bioinformatics/btaf474.](https://doi.org/10.1093/bioinformatics/btaf474)\n",
  "github_repo": "rrwick/Autocycler",
  "github_stars": 232,
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  "homepage": "https://github.com/rrwick/Autocycler",
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  "license": "GPL-3.0-or-later",
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  "name": "autocycler",
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  "ruby_source_path": "Formula/a/autocycler.rb",
  "tap": "homebrew/core",
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  "version_head": "HEAD",
  "version_stable": "0.6.2",
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