btllib

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  "github_readme_excerpt": "[![GitHub release (latest by date)](https://img.shields.io/github/v/release/BirolLab/btllib?label=Release)](https://github.com/BirolLab/btllib/releases/latest)\n[![Conda](https://img.shields.io/conda/dn/bioconda/btllib?label=Conda%20downloads)](https://anaconda.org/bioconda/btllib)\n[![Build Status](https://dev.azure.com/BirolLab/btl_public/_apis/build/status/BirolLab.btllib)](https://dev.azure.com/BirolLab/btl_public/_build/latest?definitionId=1)\n[![DOI](https://joss.theoj.org/papers/10.21105/joss.04720/status.svg)](https://doi.org/10.21105/joss.04720)\n\n[Bioinformatics Technology Lab](http://www.birollab.ca/) common code library in C++ with Python wrappers.\n\nPlatforms\n---\n- Linux\n- MacOS\n\nInstallation for users\n---\nThe recommended way is to download using [Conda](https://docs.conda.io/en/latest/) package manager:  \n`conda install -c bioconda -c conda-forge btllib`\n\nAlternatively, you can compile the code from source. Download `btllib-$VERSION.tar.gz` from the GitHub [latest release](https://github.com/BirolLab/btllib/releases/latest) where `$VERSION` is the latest btllib version and do the following:\n- `tar xzf btllib-$VERSION.tar.gz` to extract the source code.\n- Have the dependencies ready:\n  * GCC 6+ or Clang 5+ (with OpenMP and C++17 support)\n  * Python 3.9+\n  * Meson and Ninja Python3 packages, CMake (If not available, these will be automatically installed to a temporary directory.)\n- Run `btllib/compile`\n  * This will install btllib in the `btllib/install` directory. You can provide the `--prefix` parameter to change this.\n  * The C++ compiler must be the same as the one used for compiling Python. E.g. if you installed Python using a package manager, you should use the C++ compiler from the same package manager. You can change the compiler by exporting the `CXX` environment variable to point to the compiler before running `btllib/compile`.\n  * You can optionally run `python3 -m pip install $PREFIX/lib/btllib/python` afterwards to install the Python package. The",
  "github_repo": "bcgsc/btllib",
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  "github_topics": [
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    "bioinformatics",
    "bloom-filter",
    "cpp",
    "data-structures",
    "genome",
    "library",
    "python"
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  "license": "GPL-3.0-or-later",
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  "ruby_source_path": "Formula/b/btllib.rb",
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